Access the full text.
Sign up today, get DeepDyve free for 14 days.
Tatiana Rubtsova, Maurice Moens, Franco Lamberti, Yu He, Derek Brown, S. Subbotin (2005)
A molecular phylogenetic approach to Longidoridae (Nematoda: Dorylaimida)Nematology, 7
F. Lamberti, S. Molinari, M. Moens, Djf Brown (2000)
The Xiphinema americanum group. I. Putative species, their geographical occurrence and distribution, and regional polytomous identification keys for the group.Russian Journal of Nematology, 8
L. Lordello, C. Costa (1961)
A new nematode parasite of coffee roots in Brazil.Revista Brasileira De Biologia, 21
D. Sturhan, W. Wouts, G. Grandison, C. Barber (1997)
Nematode vectors of plant viruses in New ZealandNew Zealand Journal of Zoology, 24
D. Hunt (1993)
Aphelenchida, Longidoridae and Trichodoridae: their systematics and bionomics.
CLAUDIO Oliveira, B. Fenton, G. Malloch, DEREK Brown, Roy Neilson (2005)
Development of species‐specific primers for the ectoparasitic nematode species Xiphinema brevicolle, X. diffusum, X. elongatum, X. ifacolum and X. longicaudatum (Nematoda: Longidoridae) based on ribosomal DNA sequencesAnnals of Applied Biology, 146
J. Thompson, T. Gibson, F. Plewniak, F. Jeanmougin, D. Higgins (1997)
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.Nucleic acids research, 25 24
M. Holterman, K. Rybarczyk, S. Elsen, H. Megen, P. Mooyman, R. Santiago, T. Bongers, J. Bakker, J. Helder (2008)
A ribosomal DNA‐based framework for the detection and quantification of stress‐sensitive nematode families in terrestrial habitatsMolecular Ecology Resources, 8
N. Bell, L. Davis, S. Sarathchandra, B. Barratt, C. Ferguson, R. Townsend (2005)
Biodiversity of indigenous tussock grassland sites in Otago, Canterbury and the central North Island of New Zealand II. NematodesJournal of the Royal Society of New Zealand, 35
F. Lamberti, C. Taylor, J. Seinhorst (1975)
Nematode Vectors of Plant Viruses
A. Ryss, Fam Bin' (1989)
Plant-parasitic nematodes of the genus Pratylenchus from Vietnam., 194
(1997)
Gapped BLAST and PSI-BLAST: A new
M. Cummings (2004)
PAUP* [Phylogenetic Analysis Using Parsimony (and Other Methods)]Dictionary of Bioinformatics and Computational Biology
P. Loof, A. Coomans, P. Baujard, M. Luc (2001)
On five species of the genus Xiphinema Cobb, 1913 (Nematoda: Longidoridae) recently described from IndiaNematology, 3
Derek Brown, J. Halbrendt, A. Jones, T. Vrain, R. Robbins (1994)
Transmission of three North American nepoviruses by populations of four distinct species of the Xiphinema americanum group.Phytopathology, 84
R. Floyd, Eyualem Abebe, A. Papert, M. Blaxter (2002)
Molecular barcodes for soil nematode identificationMolecular Ecology, 11
J. Baldwin, L. Frisse, J. Vida, C. Eddleman, W. Thomas (1997)
An evolutionary framework for the study of developmental evolution in a set of nematodes related to Caenorhabditis elegans.Molecular phylogenetics and evolution, 8 2
J. Felsenstein (1985)
CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAPEvolution, 39
D. Trudgill, D. Brown, D. Mcnamara (1983)
Methods and criteria for assessing the transmission of plant viruses by longidorid nematodes., 6
K. Boutsika, M. Phillips, S. MacFarlane, Derek Brown, R. Holeva, V. Blok (2004)
Molecular diagnostics of some trichodorid nematodes and associated Tobacco rattle virusPlant Pathology, 53
Norihiko Saitou, M. Nei (1987)
The neighbor-joining method
(2001)
On five species
SF Altschul, TL Madden, AA Schäffer, J Zhang, Z Zhang, W Miller (1997)
Gapped BLAST and PSI-BLAST: a new generation of protein database search programsNucleic Acids Research, 25
J. Seinhorst (1959)
A Rapid Method for the Transfer of Nematodes From Fixative To Anhydrous GlycerinNematologica, 4
Xin-rong Wang, N. Bosselut, Chantal Castagnone, R. Voisin, P. Abad, D. Esmenjaud (2003)
Multiplex Polymerase Chain Reaction Identification of Single Individuals of the Longidorid Nematodes Xiphinema index, X. diversicaudatum, X. vuittenezi, and X. italiae Using Specific Primers from Ribosomal Genes.Phytopathology, 93 2
F. Lamberti, A. Ciancio, A. Agostinelli, M. Coiro (1991)
RELATIONSHIP BETWEEN XIPHINEMA BREVICOLLE AND X. DIFFUSUM WITH A REDESCRIPTION OF C. BREVICOLLE AND DESCRIPTIONS OF THREE NEW SPECIES OF XIPHINEMA (NEMATODA: DORYLAIMIDA), 19
S. Kumari, J. Polák, Roman Choutka (2005)
Plant-parasitic nematodes of the genus Xiphinema (Nematoda: Longidoridae) in the vineyards of the Czech RepublicNematology, 7
DL Swofford (2002)
PAUP*. Phylogenetic analysis using parsimony (*and other methods). Version 4
S. Bulman, M. Stufkens, V. Eastop, D. Teulon (2005)
Rhopalosiphum aphids in New Zealand. II. DNA sequences reveal two incompletely described speciesNew Zealand Journal of Zoology, 32
P. Loof, A. Skwiercz (2001)
On Aphelenchoides teres (G. Schneider, 1927) Filipjev, 1934 (Nematoda)Nematology, 3
N Saitou, M Nei (1987)
The neighbour-joining method: a new method for reconstructing phylogenetic treesMolecular Biology and Evolution, 4
M. Luc, A. Coomans, P. Loof, P. Baujard (1998)
The Xiphinema americanum-group (Nematoda : Longidoridae). 2. Observations on Xiphinema brevicollum Lordello & da Costa, 1961 and comments on the groupFundamental and applied nematology, 21
S. Bulman, J. Marshall (1998)
Detection of Spongospora subterranea in potato tuber lesions using the polymerase chain reaction (PCR)Plant Pathology, 47
D. Brown, W. Robertson, D. Trudgill (1995)
Transmission of viruses by plant nematodes.Annual review of phytopathology, 33
(1987)
The neighbour-joining method: a new method
Diann-Yih Chen, H. Ni, J. Yen, Yung-Hsiung Cheng, T. Tsay (2005)
Differentiation of the Xiphinema americanum -group nematodes X. brevicollum , X. incognitum , X. diffusum and X. oxycaudatum in Taiwan by morphometrics and nuclear ribosomal DNA sequencesNematology, 7
B. Ferrari, M. Power, P. Bergquist (2007)
Closed-tube DNA extraction using a thermostable proteinase is highly sensitive, capable of single parasite detectionBiotechnology Letters, 29
M. Kimura (1980)
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequencesJournal of Molecular Evolution, 16
Some nematode species in the Longidoridae are important agricultural pests because they are vectors of nepoviruses. Species in the Xiphinema americanum group have been widely studied because they transmit at least four nepoviruses. The identity, taxonomy and worldwide distribution of nematodes in the group remain much debated. At least three species in this group have been described from New Zealand, but DNA techniques were not used in these studies. These techniques are highly discriminatory for identifying closely related species. We are in the process of barcoding New Zealand nematodes for biosecurity and pest management purposes. Here we describe the identification of X. brevicollum, a nematode from the X. americanum group, using DNA sequencing of the ribosomal large subunit D2/D3 and internal transcribed spacer-1 regions, from New Zealand. Additional keywords: cloning, ZyGEM DNA extraction.
Australasian Plant Pathology – Springer Journals
Published: Jan 18, 2011
Read and print from thousands of top scholarly journals.
Already have an account? Log in
Bookmark this article. You can see your Bookmarks on your DeepDyve Library.
To save an article, log in first, or sign up for a DeepDyve account if you don’t already have one.
Copy and paste the desired citation format or use the link below to download a file formatted for EndNote
Access the full text.
Sign up today, get DeepDyve free for 14 days.
All DeepDyve websites use cookies to improve your online experience. They were placed on your computer when you launched this website. You can change your cookie settings through your browser.