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- Publisher
- Springer Journals
- Copyright
- Copyright © 2009 by Humana Press Inc.
- Subject
- Biomedicine; Computational Biology/Bioinformatics; Biotechnology; Neurology ; Computer Appl. in Life Sciences ; Neurosciences
- ISSN
- 1539-2791
- eISSN
- 1559-0089
- DOI
- 10.1007/s12021-008-9040-z
- pmid
- 19156543
- Publisher site
- See Article on Publisher Site
Abstract
Here we describe the Wake Forest University Pipeline, a fully automated method for the processing of fMRI data using SPM. The method includes fully automated data transfer and archiving from the point of acquisition, real-time batch script generation, distributed grid processing, interface to SPM in MATLAB, error recovery and data provenance, DICOM conversion and PACS insertion. It has been used for automated processing of fMRI experiments, as well as for the clinical implementation of fMRI and spin-tag perfusion imaging. The pipeline requires no manual intervention, and can be extended to any studies requiring offline processing.
Journal
Neuroinformatics – Springer Journals
Published: Jan 21, 2009