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Involvement of the distal Arg residue in Cl- binding of midge larval haemoglobin

Involvement of the distal Arg residue in Cl- binding of midge larval haemoglobin Monomeric haemoglobin component V (Hb V) from the larva of the midge Propsilocerus akamusi shows high Cl- affinity under high salt concentrations at acidic pH. In order to understand the structural changes that depend on Cl- binding, crystal structures of Hb V were determined under acidic high-salt conditions and the structural changes arising from different haem-bound ligands were simulated. Crystal structures of Hb V under acidic high-salt conditions indicated that the side chain of ArgE10 on the distal face of the haem contributes to stabilizing haem-bound Cl-. The conformation of the Arg side chain in the Cl--bound form was almost identical to that in ligated Hb V at neutral pH but not to that in met Hb V under acidic salt-free conditions. Furthermore, preliminary molecular-dynamics simulations also indicated that the swinging of the Arg side chain into the haem pocket depends on Cl- ligation. This result suggests that, like pH change, Cl- binding affects the location of the distal Arg residue. Owing to the increased positive electrostatic potential observed in the haem pocket at acidic pH, it was concluded that electrostatic changes caused by pH change and anionic ligand binding may affect the behaviour of the polar Arg residue. http://www.deepdyve.com/assets/images/DeepDyve-Logo-lg.png Acta Crystallographica Section D: Biological Crystallography International Union of Crystallography

Involvement of the distal Arg residue in Cl- binding of midge larval haemoglobin

Involvement of the distal Arg residue in Cl- binding of midge larval haemoglobin

Acta Crystallographica Section D: Biological Crystallography , Volume 67 (5): 488 – Apr 16, 2011

Abstract

Monomeric haemoglobin component V (Hb V) from the larva of the midge Propsilocerus akamusi shows high Cl- affinity under high salt concentrations at acidic pH. In order to understand the structural changes that depend on Cl- binding, crystal structures of Hb V were determined under acidic high-salt conditions and the structural changes arising from different haem-bound ligands were simulated. Crystal structures of Hb V under acidic high-salt conditions indicated that the side chain of ArgE10 on the distal face of the haem contributes to stabilizing haem-bound Cl-. The conformation of the Arg side chain in the Cl--bound form was almost identical to that in ligated Hb V at neutral pH but not to that in met Hb V under acidic salt-free conditions. Furthermore, preliminary molecular-dynamics simulations also indicated that the swinging of the Arg side chain into the haem pocket depends on Cl- ligation. This result suggests that, like pH change, Cl- binding affects the location of the distal Arg residue. Owing to the increased positive electrostatic potential observed in the haem pocket at acidic pH, it was concluded that electrostatic changes caused by pH change and anionic ligand binding may affect the behaviour of the polar Arg residue.

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References (54)

Publisher
International Union of Crystallography
Copyright
Copyright (c) 2011 International Union of Crystallography
Subject
insect haemoglobins, anion binding, electrostatic potential, molecular dynamics
ISSN
0907-4449
eISSN
1399-0047
DOI
10.1107/S0907444911010808
pmid
21543852
Publisher site
See Article on Publisher Site

Abstract

Monomeric haemoglobin component V (Hb V) from the larva of the midge Propsilocerus akamusi shows high Cl- affinity under high salt concentrations at acidic pH. In order to understand the structural changes that depend on Cl- binding, crystal structures of Hb V were determined under acidic high-salt conditions and the structural changes arising from different haem-bound ligands were simulated. Crystal structures of Hb V under acidic high-salt conditions indicated that the side chain of ArgE10 on the distal face of the haem contributes to stabilizing haem-bound Cl-. The conformation of the Arg side chain in the Cl--bound form was almost identical to that in ligated Hb V at neutral pH but not to that in met Hb V under acidic salt-free conditions. Furthermore, preliminary molecular-dynamics simulations also indicated that the swinging of the Arg side chain into the haem pocket depends on Cl- ligation. This result suggests that, like pH change, Cl- binding affects the location of the distal Arg residue. Owing to the increased positive electrostatic potential observed in the haem pocket at acidic pH, it was concluded that electrostatic changes caused by pH change and anionic ligand binding may affect the behaviour of the polar Arg residue.

Journal

Acta Crystallographica Section D: Biological CrystallographyInternational Union of Crystallography

Published: Apr 16, 2011

Keywords: insect haemoglobins ; anion binding ; electrostatic potential ; molecular dynamics .

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