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A new phasing method based on the principle of minimum charge

A new phasing method based on the principle of minimum charge A new method for phase determination in X-ray crystallography is proposed. The method is based on the so-called `minimum-charge' principle, recently suggested by Elser Acta Cryst. (1999), A55, 489-499. The electron-density function is sought in the form = , where is an -component real function. The norm is minimized under the constraint imposed by the measured data on the amplitudes of Fourier harmonics of . Compared with the straightforward implementation of the `minimum-charge' scheme, the method attenuates the Gibbs phenomenon and is also capable of extrapolation of the diffraction data beyond the set of measured amplitudes. The method is applicable to quasicrystals under the condition that the number of components of the function is bigger than the dimensionality of the `atomic surface'. It has been successfully tested on synthetic data for a Fibonacci chain and octagonal tiling. In the latter case, the reconstructed density map shows the shape of the atomic surface, despite relatively low resolution data. http://www.deepdyve.com/assets/images/DeepDyve-Logo-lg.png Acta Crystallographica Section A: Foundations of Crystallography International Union of Crystallography

A new phasing method based on the principle of minimum charge

A new phasing method based on the principle of minimum charge


Abstract

A new method for phase determination in X-ray crystallography is proposed. The method is based on the so-called `minimum-charge' principle, recently suggested by Elser Acta Cryst. (1999), A55, 489-499. The electron-density function is sought in the form = , where is an -component real function. The norm is minimized under the constraint imposed by the measured data on the amplitudes of Fourier harmonics of . Compared with the straightforward implementation of the `minimum-charge' scheme, the method attenuates the Gibbs phenomenon and is also capable of extrapolation of the diffraction data beyond the set of measured amplitudes. The method is applicable to quasicrystals under the condition that the number of components of the function is bigger than the dimensionality of the `atomic surface'. It has been successfully tested on synthetic data for a Fibonacci chain and octagonal tiling. In the latter case, the reconstructed density map shows the shape of the atomic surface, despite relatively low resolution data.

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References (22)

Publisher
International Union of Crystallography
Copyright
Copyright (c) 2001 International Union of Crystallography
Subject
minimum charge, phase determination, quasicrystals
ISSN
0108-7673
eISSN
1600-5724
DOI
10.1107/S0108767301013186
Publisher site
See Article on Publisher Site

Abstract

A new method for phase determination in X-ray crystallography is proposed. The method is based on the so-called `minimum-charge' principle, recently suggested by Elser Acta Cryst. (1999), A55, 489-499. The electron-density function is sought in the form = , where is an -component real function. The norm is minimized under the constraint imposed by the measured data on the amplitudes of Fourier harmonics of . Compared with the straightforward implementation of the `minimum-charge' scheme, the method attenuates the Gibbs phenomenon and is also capable of extrapolation of the diffraction data beyond the set of measured amplitudes. The method is applicable to quasicrystals under the condition that the number of components of the function is bigger than the dimensionality of the `atomic surface'. It has been successfully tested on synthetic data for a Fibonacci chain and octagonal tiling. In the latter case, the reconstructed density map shows the shape of the atomic surface, despite relatively low resolution data.

Journal

Acta Crystallographica Section A: Foundations of CrystallographyInternational Union of Crystallography

Published: Oct 26, 2001

Keywords: minimum charge; phase determination; quasicrystals.

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