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Thematic Issue on HYDRUS Software Applications to Subsurface Fluid Flow and Contaminant Transport

Thematic Issue on HYDRUS Software Applications to Subsurface Fluid Flow and Contaminant Transport REFERENCESBakker, M., Schaars, F., Hughes, J.D., Langevin, C.D., Dausman, A.M., 2013. Documentation of the Seawater Intrusion (SWI2) Package for MODFLOW. US Geological Survey Techniques and Methods, Book 6, Chap. A46, 47 p.Beegum, S., Šimůnek, J., Szymkiewicz, A., Sudheer, K.P., Nambi, I.M., 2018. Implementation of solute transport in the vadose zone into the ‘HYDRUS package for MODFLOW’. Groundwater, (under review).Deurer, M., Bachmann, J., 2007. Modeling water movement in heterogeneous water-repellent soil: 2. A conceptual numerical simulation. Vadose Zone Journal, 6, 446–457. DOI: 10.2136/vzj2006.0061.http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000249015500003&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f310.2136/vzj2006.0061Diamantopoulos, E., Durner, W., Reszkowska, A., Bachmann, J., 2013. Effect of soil water repellency on soil hydraulic properties estimated under dynamic conditions. Journal of Hydrology, 486, 175–186.http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000317537400013&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f3Hartmann, A., Šimůnek, J., Aidoo, M.K., Seidel, S.J., Lazarovitch, N., 2018. Modeling root growth as a function of different environmental stresses using HYDRUS. Vadose Zone Journal, 17, 16 p. DOI: 10.2136/vzj2017.02.0040.10.2136/vzj2017.02.0040Hlaváčiková, H., Novák, V., Šimůnek, J., 2016. The effects of rock fragment shapes and positions on modeled hydraulic conductivities of stony soils. Geoderma, 281, 39–48. DOI: 10.1016/j.geoderma.2016.06.034.10.1016/j.geoderma.2016.06.034http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000381544000005&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f3Jones, J.W., Hoogenboom, G., Porter, C.H., Boote, K.J., Batchelor, W.D., Hunt, L.A., Wilkens, P.W., Singh, U., Gijsman, A.J., Ritchie, J.T., 2003. DSSAT cropping system model. European Journal of Agronomy, 18, 235–265.http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000255675500009&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f310.1016/S1161-0301(02)00107-7Langergraber, G., Šimůnek, J., 2012. Reactive transport modeling of subsurface flow constructed wetlands using the HYDRUS Wetland module. Vadose Zone Journal, 11, 2, 14 p. DOI: 10.2136/vzj2011.0104.http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000306830700012&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f310.2136/vzj2011.0104McDonald, M.G., Harbaugh, A.W., 2003. The history of MODFLOW. Ground Water, 41, 2, 280–283.10.1111/j.1745-6584.2003.tb02591.xNovák, V., Kňava, K., Šimůnek, J., 2011. Determining the influence of stones on hydraulic conductivity of saturated soils using numerical method. Geoderma, 161, 3–4, 177–181. DOI: 10.1016/j.geoderma.2010.12.016.10.1016/j.geoderma.2010.12.016http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000288474300008&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f3Parajuli, K., Sadeghi, M., Jones, S.B., 2017. A binary mixing model for characterizing stony-soil water retention. Agricultural and Forest Meteorology, 244–245, 1–8.Parkhurst, D.L., Appelo, C.A.J., 2013. Description of input and examples for PHREEQC Version 3 - A computer program for speciation, batch-reaction, one-dimensional transport, and inverse geochemical calculations. Chapter 43 of Section A, Ground Water, Book 6, Modeling Techniques. U.S. Department of the Interior, U.S. Geological Survey, Reston, Virginia, 497 p.Robinson, D.A., Lebron, I., Ryel, R.J., Jones, S.B., 2010. Soil water repellency, a method of soil moisture sequestration in Pinyon-Juniper woodland. Soil Science Society of America Journal, 74, 2, 624–634.http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000275187300032&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f310.2136/sssaj2009.0208Scanlon, B.R., Christman, M., Reedy, R.C., Porro, I., Šimůnek, J., Flerchinger, G.F., 2002. Intercode comparisons for simulating water balance of surficial sediments in semiarid regions. Water Resources Research, 38, 12, 1323, 59.1–59.16. DOI: 10.1029/2001WR001233.10.1029/2001WR001233Schelle, H., Iden, S.C., Peters, A., Durner, W., 2010. Analysis of the agreement of soil hydraulic properties obtained from multistep-outflow and evaporation methods. Vadose Zone Journal, 9, 4, 1080–1091.http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000287739800025&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f310.2136/vzj2010.0050Schindler, J., Durner, W., von Unold, G., Müller, L., 2010. Evaporation method for measuring unsaturated hydraulic properties of soils: Extending the measurement range. Soil Science Society of America Journal, 74, 4, 1071–1083.10.2136/sssaj2008.0358Šimůnek, J., 2005. Models of water flow and solute transport in the unsaturated zone. In: Anderson, M.G., McDonnell, J.J. (Eds): Encyclopedia of Hydrological Sciences, Chapter 78. John Wiley & Sons, Ltd., Chichester, UK, pp. 1171–1180.Šimůnek, J., Bradford, S.A., 2008. Vadose Zone Modeling: Introduction and importance. Vadose Zone Journal, 7, 2, 581–586. DOI: 10.2136/VZJ2008.0012.10.2136/vzj2008.0012http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000256204600020&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f3Šimůnek, J., Wendroth, O., van Genuchten, M.T., 1998. Parameter estimation analysis of the evaporation method for determining soil hydraulic properties. Soil Science Society of America Journal, 62, 4, 894–905.10.2136/sssaj1998.03615995006200040007xŠimůnek, J., van Genuchten, M.Th., Šejna, M., 2016. Recent developments and applications of the HYDRUS computer software packages. Vadose Zone Journal, 15, 7, 25 p. DOI: 10.2136/vzj2016.04.0033.http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000381301700006&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f310.2136/vzj2016.04.0033Steefel, C.I., Appelo, C.A.J., Arora, B., Jacques, D., Kalbacher, T., Kolditz, O., Lagneau, V., Lichtner, P.C., Mayer, K.U., Meeussen, J.C.L., Molins, S., Moulton, D., Shao, H., Šimůnek, J., Spycher, N., Yabusaki, S.B., Yeh, G.T., 2015. Reactive transport codes for subsurface environmental simulation. Computational Geosciences, 19, 3, 445–478. DOI: 10.1007/s10596-014-9443-x.http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000356878900002&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f310.1007/s10596-014-9443-xTwarakavi, N.K.C., Šimůnek, J., Seo, H.S., 2008. Evaluating interactions between groundwater and vadose zone using HYDRUS-based flow package for MODFLOW. Vadose Zone Journal, 7, 2, 757–768.10.2136/vzj2007.0082http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000256204600034&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f3Vereecken, H., Schnepf, A., Hopmans, J.W., Javaux, M., Or, D., Roose, T., Vanderborght, J., Young, M.H., Amelung, W., Aitkenhead, M., Allisson, S.D., Assouline, S., Baveye, P., Berli, M., Brüggemann, N., Finke, P., Flury, M., Geiser, T., Govers, G., Ghezzehei, T., Hallett, P., Hendricks Franssen, H.J., Heppel, J., Horn, R., Huisman, J.A., Jacques, D., Jonard, F., Kollet, S., Lafolie, F., Lamorski, K., Leitner, D., McBratney, A., Minasny, B., Montzka, C., Nowak, W., Pachepsky, Y., Padarian, J., Romano, N., Roth, K., Rothfuss, Y., Rowe, E.C., Schwen, A., Šimůnek, J., Titak, A., van Dam, J., van der Zee, S.E.A.T.M., Vogel, H.J., Vrugt, J.A., Wöhling, T., Young, I.M., 2016. Modeling soil processes: Review, key challenges, and new perspectives. Vadose Zone Journal, 15, 5, 57 p. DOI: 10.2136/vzj2015.09.0131.10.2136/vzj2015.09.0131 http://www.deepdyve.com/assets/images/DeepDyve-Logo-lg.png Journal of Hydrology and Hydromechanics de Gruyter

Thematic Issue on HYDRUS Software Applications to Subsurface Fluid Flow and Contaminant Transport

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Publisher
de Gruyter
Copyright
© 2018 Jiří Šimůnek et al., published by De Gruyter Open
ISSN
0042-790X
eISSN
0042-790X
DOI
10.1515/johh-2017-0060
Publisher site
See Article on Publisher Site

Abstract

REFERENCESBakker, M., Schaars, F., Hughes, J.D., Langevin, C.D., Dausman, A.M., 2013. Documentation of the Seawater Intrusion (SWI2) Package for MODFLOW. US Geological Survey Techniques and Methods, Book 6, Chap. A46, 47 p.Beegum, S., Šimůnek, J., Szymkiewicz, A., Sudheer, K.P., Nambi, I.M., 2018. Implementation of solute transport in the vadose zone into the ‘HYDRUS package for MODFLOW’. Groundwater, (under review).Deurer, M., Bachmann, J., 2007. Modeling water movement in heterogeneous water-repellent soil: 2. A conceptual numerical simulation. Vadose Zone Journal, 6, 446–457. DOI: 10.2136/vzj2006.0061.http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000249015500003&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f310.2136/vzj2006.0061Diamantopoulos, E., Durner, W., Reszkowska, A., Bachmann, J., 2013. Effect of soil water repellency on soil hydraulic properties estimated under dynamic conditions. Journal of Hydrology, 486, 175–186.http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000317537400013&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f3Hartmann, A., Šimůnek, J., Aidoo, M.K., Seidel, S.J., Lazarovitch, N., 2018. Modeling root growth as a function of different environmental stresses using HYDRUS. Vadose Zone Journal, 17, 16 p. DOI: 10.2136/vzj2017.02.0040.10.2136/vzj2017.02.0040Hlaváčiková, H., Novák, V., Šimůnek, J., 2016. The effects of rock fragment shapes and positions on modeled hydraulic conductivities of stony soils. Geoderma, 281, 39–48. DOI: 10.1016/j.geoderma.2016.06.034.10.1016/j.geoderma.2016.06.034http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000381544000005&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f3Jones, J.W., Hoogenboom, G., Porter, C.H., Boote, K.J., Batchelor, W.D., Hunt, L.A., Wilkens, P.W., Singh, U., Gijsman, A.J., Ritchie, J.T., 2003. DSSAT cropping system model. European Journal of Agronomy, 18, 235–265.http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000255675500009&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f310.1016/S1161-0301(02)00107-7Langergraber, G., Šimůnek, J., 2012. Reactive transport modeling of subsurface flow constructed wetlands using the HYDRUS Wetland module. Vadose Zone Journal, 11, 2, 14 p. DOI: 10.2136/vzj2011.0104.http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000306830700012&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f310.2136/vzj2011.0104McDonald, M.G., Harbaugh, A.W., 2003. The history of MODFLOW. Ground Water, 41, 2, 280–283.10.1111/j.1745-6584.2003.tb02591.xNovák, V., Kňava, K., Šimůnek, J., 2011. Determining the influence of stones on hydraulic conductivity of saturated soils using numerical method. Geoderma, 161, 3–4, 177–181. DOI: 10.1016/j.geoderma.2010.12.016.10.1016/j.geoderma.2010.12.016http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000288474300008&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f3Parajuli, K., Sadeghi, M., Jones, S.B., 2017. A binary mixing model for characterizing stony-soil water retention. Agricultural and Forest Meteorology, 244–245, 1–8.Parkhurst, D.L., Appelo, C.A.J., 2013. Description of input and examples for PHREEQC Version 3 - A computer program for speciation, batch-reaction, one-dimensional transport, and inverse geochemical calculations. Chapter 43 of Section A, Ground Water, Book 6, Modeling Techniques. U.S. Department of the Interior, U.S. Geological Survey, Reston, Virginia, 497 p.Robinson, D.A., Lebron, I., Ryel, R.J., Jones, S.B., 2010. Soil water repellency, a method of soil moisture sequestration in Pinyon-Juniper woodland. Soil Science Society of America Journal, 74, 2, 624–634.http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000275187300032&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f310.2136/sssaj2009.0208Scanlon, B.R., Christman, M., Reedy, R.C., Porro, I., Šimůnek, J., Flerchinger, G.F., 2002. Intercode comparisons for simulating water balance of surficial sediments in semiarid regions. Water Resources Research, 38, 12, 1323, 59.1–59.16. DOI: 10.1029/2001WR001233.10.1029/2001WR001233Schelle, H., Iden, S.C., Peters, A., Durner, W., 2010. Analysis of the agreement of soil hydraulic properties obtained from multistep-outflow and evaporation methods. Vadose Zone Journal, 9, 4, 1080–1091.http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000287739800025&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f310.2136/vzj2010.0050Schindler, J., Durner, W., von Unold, G., Müller, L., 2010. Evaporation method for measuring unsaturated hydraulic properties of soils: Extending the measurement range. Soil Science Society of America Journal, 74, 4, 1071–1083.10.2136/sssaj2008.0358Šimůnek, J., 2005. Models of water flow and solute transport in the unsaturated zone. In: Anderson, M.G., McDonnell, J.J. (Eds): Encyclopedia of Hydrological Sciences, Chapter 78. John Wiley & Sons, Ltd., Chichester, UK, pp. 1171–1180.Šimůnek, J., Bradford, S.A., 2008. Vadose Zone Modeling: Introduction and importance. Vadose Zone Journal, 7, 2, 581–586. DOI: 10.2136/VZJ2008.0012.10.2136/vzj2008.0012http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000256204600020&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f3Šimůnek, J., Wendroth, O., van Genuchten, M.T., 1998. Parameter estimation analysis of the evaporation method for determining soil hydraulic properties. Soil Science Society of America Journal, 62, 4, 894–905.10.2136/sssaj1998.03615995006200040007xŠimůnek, J., van Genuchten, M.Th., Šejna, M., 2016. Recent developments and applications of the HYDRUS computer software packages. Vadose Zone Journal, 15, 7, 25 p. DOI: 10.2136/vzj2016.04.0033.http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000381301700006&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f310.2136/vzj2016.04.0033Steefel, C.I., Appelo, C.A.J., Arora, B., Jacques, D., Kalbacher, T., Kolditz, O., Lagneau, V., Lichtner, P.C., Mayer, K.U., Meeussen, J.C.L., Molins, S., Moulton, D., Shao, H., Šimůnek, J., Spycher, N., Yabusaki, S.B., Yeh, G.T., 2015. Reactive transport codes for subsurface environmental simulation. Computational Geosciences, 19, 3, 445–478. DOI: 10.1007/s10596-014-9443-x.http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000356878900002&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f310.1007/s10596-014-9443-xTwarakavi, N.K.C., Šimůnek, J., Seo, H.S., 2008. Evaluating interactions between groundwater and vadose zone using HYDRUS-based flow package for MODFLOW. Vadose Zone Journal, 7, 2, 757–768.10.2136/vzj2007.0082http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000256204600034&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=b7bc2757938ac7a7a821505f8243d9f3Vereecken, H., Schnepf, A., Hopmans, J.W., Javaux, M., Or, D., Roose, T., Vanderborght, J., Young, M.H., Amelung, W., Aitkenhead, M., Allisson, S.D., Assouline, S., Baveye, P., Berli, M., Brüggemann, N., Finke, P., Flury, M., Geiser, T., Govers, G., Ghezzehei, T., Hallett, P., Hendricks Franssen, H.J., Heppel, J., Horn, R., Huisman, J.A., Jacques, D., Jonard, F., Kollet, S., Lafolie, F., Lamorski, K., Leitner, D., McBratney, A., Minasny, B., Montzka, C., Nowak, W., Pachepsky, Y., Padarian, J., Romano, N., Roth, K., Rothfuss, Y., Rowe, E.C., Schwen, A., Šimůnek, J., Titak, A., van Dam, J., van der Zee, S.E.A.T.M., Vogel, H.J., Vrugt, J.A., Wöhling, T., Young, I.M., 2016. Modeling soil processes: Review, key challenges, and new perspectives. Vadose Zone Journal, 15, 5, 57 p. DOI: 10.2136/vzj2015.09.0131.10.2136/vzj2015.09.0131

Journal

Journal of Hydrology and Hydromechanicsde Gruyter

Published: Jun 1, 2018

References